3LZR Transport Protein date Mar 01, 2010
title Crystal Structure Analysis Of Manganese Treated P19 Protein Campylobacter Jejuni At 2.73 A At Ph 9 And Manganese Peak W (1.893 A)
authors T.I.Doukov, A.C.K.Chan, M.Scofield, A.B.Ramin, S.A.L.Tom-Yew, M.E
compound source
Molecule: P19 Protein
Chain: A, B
Fragment: Residues 22-179
Engineered: Yes
Organism_scientific: Campylobacter Jejuni
Organism_taxid: 354242
Strain: 81-176
Gene: Cjj81176_1650, Gene Cj81176_1659
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet19
symmetry Space Group: P 21 21 2
R_factor 0.195 R_Free 0.245
crystal
cell
length a length b length c angle alpha angle beta angle gamma
54.499 73.797 75.217 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.73 Å
ligand CU, MN, SO4 enzyme
Gene CJ81176 ; CJJ81176
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure and Function of P19, a High-Affinity Iron Transporter of the Human Pathogen Campylobacter jejuni., Chan AC, Doukov TI, Scofield M, Tom-Yew SA, Ramin AB, Mackichan JK, Gaynor EC, Murphy ME, J Mol Biol. 2010 Jun 30. PMID:20600116
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (110 Kb) [Save to disk]
  • Biological Unit Coordinates (3lzr.pdb1.gz) 104 Kb
  • LPC: Ligand-Protein Contacts for 3LZR
  • CSU: Contacts of Structural Units for 3LZR
  • Structure Factors (145 Kb)
  • Retrieve 3LZR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3LZR from S2C, [Save to disk]
  • Re-refined 3lzr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3LZR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3LZR
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3LZR, from MSDmotif at EBI
  • Fold representative 3lzr from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3lzr_B] [3lzr] [3lzr_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3LZR
  • Community annotation for 3LZR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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