3M66 Transcription date Mar 15, 2010
title Crystal Structure Of Human Mitochondrial Transcription Termi Factor 3
authors H.Spahr, T.Samuelsson, B.M.Hallberg, C.M.Gustafsson
compound source
Molecule: Mterf Domain-Containing Protein 1, Mitochondrial
Chain: A
Fragment: Unp Residues 148-417
Synonym: Mterf3
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cgi-12, Mterfd1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pnic28-Bsa4;Ef198106
symmetry Space Group: C 1 2 1
R_factor 0.173 R_Free 0.199
crystal
cell
length a length b length c angle alpha angle beta angle gamma
139.230 32.240 70.220 90.00 106.59 90.00
method X-Ray Diffractionresolution 1.60 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of mitochondrial transcription termination factor 3 reveals a novel nucleic acid-binding domain., Spahr H, Samuelsson T, Hallberg BM, Gustafsson CM, Biochem Biophys Res Commun. 2010 Apr 27. PMID:20430012
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (100 Kb) [Save to disk]
  • Biological Unit Coordinates (3m66.pdb1.gz) 95 Kb
  • CSU: Contacts of Structural Units for 3M66
  • Structure Factors (584 Kb)
  • Retrieve 3M66 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3M66 from S2C, [Save to disk]
  • Re-refined 3m66 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3M66 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3M66
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3M66, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3m66] [3m66_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3M66: [Mterf ] by SMART
  • Other resources with information on 3M66
  • Community annotation for 3M66 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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