3M9U	Transferase	date	Mar 22, 2010
title	Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase F Lactobacillus Brevis Atcc 367
authors	Y.Patskovsky, R.Toro, M.Rutter, J.M.Sauder, S.K.Burley, S.C.Almo, Structural Genomix Research Consortium (Nysgxrc), New York S Research Center For Structural Genomics (Nysgxrc)
compound		source
Molecule: Farnesyl-Diphosphate Synthase Chain: A, B, C, D Ec: 2.5.1.10 Engineered: Yes		Organism_scientific: Lactobacillus Brevis Organism_taxid: 387344 Strain: Atcc 367 Jcm 1170 Gene: Lvis_0975 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1	R_factor 0.158 R_Free 0.196
crystal cell	length a length b length c angle alpha angle beta angle gamma 48.496 51.096 125.928 95.47 91.28 105.56
method	X-Ray Diffraction	resolution	1.77 Å
ligand	GOL	enzyme	Transferase E.C.2.5.1.10 BRENDA
Gene	LVIS
Gene Ontology	Chain Function Process Component A, D, C, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (200 Kb) [Save to disk] Biological Unit Coordinates (3m9u.pdb1.gz) 191 Kb Biological Unit Coordinates (3m9u.pdb2.gz) 96 Kb Biological Unit Coordinates (3m9u.pdb3.gz) 96 Kb Biological Unit Coordinates (3m9u.pdb4.gz) 98 Kb LPC: Ligand-Protein Contacts for 3M9U CSU: Contacts of Structural Units for 3M9U Structure Factors (2248 Kb) Retrieve 3M9U in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3M9U from S2C, [Save to disk] Re-refined 3m9u structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3M9U in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3M9U

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3M9U, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3m9u] [3m9u_A] [3m9u_D] [3m9u_C] [3m9u_B] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3M9U

Community annotation for 3M9U at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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