3MDL date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 1AG, AKR, BOG, COH, GOL, MAN, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • peroxidase activity


    • Primary referenceThe structural basis of endocannabinoid oxygenation by cyclooxygenase-2., Vecchio AJ, Malkowski MG, J Biol Chem. 2011 Jun 10;286(23):20736-45. Epub 2011 Apr 13. PMID:21489986
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (329 Kb) [Save to disk]
  • Biological Unit Coordinates (3mdl.pdb1.gz) 317 Kb
  • LPC: Ligand-Protein Contacts for 3MDL
  • CSU: Contacts of Structural Units for 3MDL
  • Structure Factors (1119 Kb)
  • Retrieve 3MDL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3MDL from S2C, [Save to disk]
  • Re-refined 3mdl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3MDL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3mdl] [3mdl_A] [3mdl_B]
  • SWISS-PROT database:
  • Domain found in 3MDL: [EGF ] by SMART

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science