3MHI Lyase Lyase Inhibitor date Apr 08, 2010
title Crystal Structure Of Human Carbonic Anhydrase Isozyme II Wit Nitro-6-Oxo-1,6-Dihydro-4-Pyrimidinyl)Amino]Methyl}Benzenes
authors S.Grazulis, E.Manakova, D.Golovenko
compound source
Molecule: Carbonic Anhydrase 2
Chain: A
Synonym: Carbonic Anhydrase II, Ca-II, Carbonate Dehydratas Carbonic Anhydrase C, Cac;
Ec: 4.2.1.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: P 1 21 1
R_factor 0.162 R_Free 0.215
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.242 41.240 71.950 90.00 104.43 90.00
method X-Ray Diffractionresolution 1.70 Å
ligand DMS, J90, ZN BindingDB enzyme Lyase E.C.4.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary reference4-[N-(Substituted 4-pyrimidinyl)amino]benzenesulfonamides as inhibitors of carbonic anhydrase isozymes I, II, VII, and XIII., Sudzius J, Baranauskiene L, Golovenko D, Matuliene J, Michailoviene V, Torresan J, Jachno J, Sukackaite R, Manakova E, Grazulis S, Tumkevicius S, Matulis D, Bioorg Med Chem. 2010 Nov 1;18(21):7413-21. Epub 2010 Sep 8. PMID:20889345
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (3mhi.pdb1.gz) 49 Kb
  • LPC: Ligand-Protein Contacts for 3MHI
  • CSU: Contacts of Structural Units for 3MHI
  • Structure Factors (959 Kb)
  • Retrieve 3MHI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3MHI from S2C, [Save to disk]
  • Re-refined 3mhi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3MHI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3MHI
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3MHI, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3mhi] [3mhi_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3MHI: [Carb_anhydrase ] by SMART
  • Other resources with information on 3MHI
  • Community annotation for 3MHI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science