3MMT Hydrolase date Apr 20, 2010
title Crystal Structure Of Fructose Bisphosphate Aldolase From Bar Henselae, Bound To Fructose Bisphosphate
authors Seattle Structural Genomics Center For Infectious Disease (S
compound source
Molecule: Fructose-Bisphosphate Aldolase
Chain: A, B, C, D
Ec: 4.1.2.13
Engineered: Yes
Organism_scientific: Bartonella Henselae
Organism_common: Rochalimaea Henselae
Organism_taxid: 38323
Gene: Bh15060, Fbab, Hm-1:Imss
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Ava0421
symmetry Space Group: P 21 21 21
R_factor 0.177 R_Free 0.222
crystal
cell
length a length b length c angle alpha angle beta angle gamma
72.390 127.710 157.630 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.35 Å
ligand 2FP enzyme Lyase E.C.4.1.2.13 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceStructure of fructose bisphosphate aldolase from Bartonella henselae bound to fructose 1,6-bisphosphate., Gardberg A, Abendroth J, Bhandari J, Sankaran B, Staker B, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 Sep 1;67(Pt, 9):1051-4. Epub 2011 Aug 13. PMID:21904049
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (427 Kb) [Save to disk]
  • Biological Unit Coordinates (3mmt.pdb1.gz) 419 Kb
  • LPC: Ligand-Protein Contacts for 3MMT
  • CSU: Contacts of Structural Units for 3MMT
  • Structure Factors (932 Kb)
  • Retrieve 3MMT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3MMT from S2C, [Save to disk]
  • Re-refined 3mmt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3MMT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3MMT
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3MMT, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3mmt_B] [3mmt_D] [3mmt_C] [3mmt_A] [3mmt]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3MMT
  • Community annotation for 3MMT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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