3MN3	Transferase	date	Apr 20, 2010
title	An Inhibited Conformation For The Protein Kinase Domain Of T Saccharomyces Cerevisiae Ampk Homolog Snf1
authors	M.J.Rudolph, G.A.Amodeo, L.Tong
compound		source
Molecule: Carbon Catabolite-Derepressing Protein Kinase Chain: A Fragment: Unp Residues 50-320 Ec: 2.7.11.1 Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Brewer'S Yeast,Lager Beer Yeast,Yeast Organism_taxid: 4932 Gene: Snf1, Cat1, Ccr1, Glc2, Pas14, Ydr477w, D8035.20 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28a
symmetry	Space Group: I 41 2 2	R_factor 0.230 R_Free 0.246
crystal cell	length a length b length c angle alpha angle beta angle gamma 76.981 76.981 286.215 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.38 Å
ligand		enzyme	Transferase E.C.2.7.11.1 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	An inhibited conformation for the protein kinase domain of the Saccharomyces cerevisiae AMPK homolog Snf1., Rudolph MJ, Amodeo GA, Tong L, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Sep 1;66(Pt, 9):999-1002. Epub 2010 Aug 21. PMID:20823513

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk] Biological Unit Coordinates (3mn3.pdb1.gz) 42 Kb Biological Unit Coordinates (3mn3.pdb2.gz) 83 Kb CSU: Contacts of Structural Units for 3MN3 Structure Factors (263 Kb) Retrieve 3MN3 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3MN3 from S2C, [Save to disk] Re-refined 3mn3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3MN3 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3MN3

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3MN3, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3mn3_A] [3mn3] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3MN3: [S_TKc ] by SMART

Other resources with information on 3MN3

Community annotation for 3MN3 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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