3MSI date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
related structures by homologous chain: 1MSI, 2JIA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe effects of steric mutations on the structure of type III antifreeze protein and its interaction with ice., DeLuca CI, Davies PL, Ye Q, Jia Z, J Mol Biol 1998 Jan 23;275(3):515-25. PMID:9466928
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (15 Kb) [Save to disk]
  • Biological Unit Coordinates (3msi.pdb1.gz) 11 Kb
  • CSU: Contacts of Structural Units for 3MSI
  • Likely Quarternary Molecular Structure file(s) for 3MSI
  • Structure Factors (62 Kb)
  • Retrieve 3MSI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3MSI from S2C, [Save to disk]
  • Re-refined 3msi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3MSI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3MSI
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 3MSI from the CEP Server.
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3MSI, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d3msi__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 3msi from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3msi] [3msi_A]
  • SWISS-PROT database: [P19614]
  • Domain organization of [ANP12_MACAM] by SWISSPFAM
  • Other resources with information on 3MSI
  • Community annotation for 3MSI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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