3MUJ	Dna Binding Protein	date	May 03, 2010
title	Early B-Cell Factor 3 (Ebf3) Ipttig And Dimerization Helice
authors	M.I.Siponen, L.Lehtio, C.H.Arrowsmith, C.Bountra, R.Collins, A.M. S.Flodin, A.Flores, S.Graslund, M.Hammarstrom, I.Johansson, T.Ka T.Kotenyova, M.Moche, P.Nordlund, T.Nyman, C.Persson, H.Schueler P.Schutz, L.Svensson, A.G.Thorsell, L.Tresaugues, S.Van Den Ber E.Wahlberg, J.Weigelt, M.Welin, M.Wisniewska, H.Berglund, Struct Genomics Consortium (Sgc)
compound		source
Molecule: Transcription Factor Coe3 Chain: A, B Fragment: Ipttig And Hlh Domain (Unp Residues 261-395) Synonym: Early B-Cell Factor 3 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Homo Sapiens Organism_taxid: 9606 Gene: Ebf3, Coe3 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3)Prare Expression_system_vector_type: Plasmid Expression_system_plasmid: Pnic-Bsa4
symmetry	Space Group: P 65	R_factor 0.170 R_Free 0.193
crystal cell	length a length b length c angle alpha angle beta angle gamma 134.680 134.680 41.150 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.92 Å
ligand	CL, EDO	enzyme
note	3MUJ is a representative structure
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural determination of functional domains in Early B-cell Factor (EBF) family of transcription factors reveals similarities to rel DNA binding proteins and a novel dimerisation motif., Siponen MI, Wisniewska M, Lehtio L, Johansson I, Svensson L, Raszewski G, Nilsson L, Sigvardsson M, Berglund H, J Biol Chem. 2010 Jun 30. PMID:20592035

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk] Biological Unit Coordinates (3muj.pdb1.gz) 50 Kb LPC: Ligand-Protein Contacts for 3MUJ CSU: Contacts of Structural Units for 3MUJ Structure Factors (396 Kb) Retrieve 3MUJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3MUJ from S2C, [Save to disk] Re-refined 3muj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3MUJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3MUJ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3MUJ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3muj] [3muj_A] [3muj_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3MUJ: [IPT ] by SMART

Other resources with information on 3MUJ

Community annotation for 3MUJ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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