3MV2	Protein Transport	date	May 03, 2010
title	Crystal Structure Of A-Cop In Complex With E-Cop
authors	A.Hoelz, K.C.Hsia
compound		source
Molecule: Coatomer Subunit Alpha Chain: A, C, E Fragment: Unp Residues 891-1192 Synonym: Alpha-Coat Protein, Alpha-Cop Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Yeast Organism_taxid: 4932 Gene: Cop1, D1578, Ret1, Sec33, Ydl145c Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Coatomer Subunit Epsilon Chain: B, D, F Synonym: Epsilon-Coat Protein, Epsilon-Cop Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Yeast Organism_taxid: 4932 Gene: Sec28, Yil076w Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 1 2 1	R_factor 0.246 R_Free 0.297
crystal cell	length a length b length c angle alpha angle beta angle gamma 329.127 74.382 97.247 90.00 102.27 90.00
method	X-Ray Diffraction	resolution	2.90 Å
Gene Ontology	Chain Function Process Component A, C, E F, D, B
Primary reference	Crystal structure of alpha-COP in complex with epsilon-COP provides insight into the architecture of the COPI vesicular coat., Hsia KC, Hoelz A, Proc Natl Acad Sci U S A. 2010 Jun 22;107(25):11271-6. Epub 2010 Jun 3. PMID:20534429

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (270 Kb) [Save to disk] Biological Unit Coordinates (3mv2.pdb1.gz) 91 Kb Biological Unit Coordinates (3mv2.pdb2.gz) 91 Kb Biological Unit Coordinates (3mv2.pdb3.gz) 90 Kb CSU: Contacts of Structural Units for 3MV2 Structure Factors (649 Kb) Retrieve 3MV2 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3MV2 from S2C, [Save to disk] Re-refined 3mv2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3MV2 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3MV2

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3MV2, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3mv2] [3mv2_D] [3mv2_A] [3mv2_C] [3mv2_B] [3mv2_E] [3mv2_F] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3MV2

Community annotation for 3MV2 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---