3MVJ Transferase date May 04, 2010
title Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Comp
authors J.Pandit, F.Vajdos
compound source
Molecule: Camp-Dependent Protein Kinase Catalytic Subunit A
Chain: A, B, E
Synonym: Pka C-Alpha
Ec: 2.7.11.11
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Pka, Pkaca, Prkaca
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_strain: Sf9

Molecule: Camp-Dependent Protein Kinase Inhibitor Alpha
Chain: I, J, K
Synonym: Pki-Alpha, Camp-Dependent Protein Kinase Inhibitor Musclebrain Isoform;
Engineered: Yes

Synthetic: Yes
symmetry Space Group: P 21 21 21
R_factor 0.212 R_Free 0.304
crystal
cell
length a length b length c angle alpha angle beta angle gamma
61.163 120.828 162.415 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.49 Å
ligand SEP, TPO, XFE enzyme Transferase E.C.2.7.11.11 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, E, B


J, K, I


Primary referenceDesign of Selective, ATP-Competitive Inhibitors of Akt., Freeman-Cook KD, Autry C, Borzillo G, Gordon D, Barbacci-Tobin E, Bernardo V, Briere D, Clark T, Corbett M, Jakubczak J, Kakar S, Knauth E, Lippa B, Luzzio MJ, Mansour M, Martinelli G, Marx M, Nelson K, Pandit J, Rajamohan F, Robinson S, Subramanyam C, Wei L, Wythes M, Morris J, J Med Chem. 2010 May 19. PMID:20481595
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (186 Kb) [Save to disk]
  • Biological Unit Coordinates (3mvj.pdb1.gz) 63 Kb
  • Biological Unit Coordinates (3mvj.pdb2.gz) 61 Kb
  • Biological Unit Coordinates (3mvj.pdb3.gz) 63 Kb
  • LPC: Ligand-Protein Contacts for 3MVJ
  • CSU: Contacts of Structural Units for 3MVJ
  • Structure Factors (660 Kb)
  • Retrieve 3MVJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3MVJ from S2C, [Save to disk]
  • Re-refined 3mvj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3MVJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3MVJ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3MVJ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3mvj_J] [3mvj_E] [3mvj_I] [3mvj_K] [3mvj_A] [3mvj_B] [3mvj]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 3MVJ: [S_TK_X] [S_TKc ] by SMART
  • Other resources with information on 3MVJ
  • Community annotation for 3MVJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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