3MWU Transferase Transferase Inhibitor date May 06, 2010
title Activated Calcium-Dependent Protein Kinase 1 From Cryptospor Parvum (Cpcdpk1) In Complex With Bumped Kinase Inhibitor Rm
authors E.T.Larson, E.A.Merritt, Medical Structural Genomics Of Pathog Protozoa, Medical Structural Genomics Of Pathogenic Protozoa
compound source
Molecule: Calmodulin-Domain Protein Kinase 1
Chain: A
Fragment: Cpcdpk1
Ec: 2.7.11.17
Engineered: Yes
Mutation: Yes
Organism_scientific: Cryptosporidium Parvum
Organism_taxid: 353152
Strain: Iowa II
Gene: Cdpk1, Cgd3_920
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15mhl
symmetry Space Group: P 1 21 1
R_factor 0.194 R_Free 0.229
crystal
cell
length a length b length c angle alpha angle beta angle gamma
60.020 55.970 82.210 90.00 104.79 90.00
method X-Ray Diffractionresolution 1.98 Å
ligand BK3, CA enzyme Transferase E.C.2.7.11.17 BRENDA
Gene CGD3
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDiscovery of Potent and Selective Inhibitors of Calcium-Dependent Protein Kinase 1 (CDPK1) from C. parvum and T. gondii., Murphy RC, Ojo KK, Larson ET, Castellanos-Gonzalez A, Perera BG, Keyloun KR, Kim JE, Bhandari JG, Muller NR, Verlinde CL, White AC, Merritt EA, Van Voorhis WC, Maly DJ, ACS Med Chem Lett. 2010 Oct 14;1(7):331-335. PMID:21116453
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (162 Kb) [Save to disk]
  • Biological Unit Coordinates (3mwu.pdb1.gz) 156 Kb
  • LPC: Ligand-Protein Contacts for 3MWU
  • CSU: Contacts of Structural Units for 3MWU
  • Structure Factors (1409 Kb)
  • Retrieve 3MWU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3MWU from S2C, [Save to disk]
  • Re-refined 3mwu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3MWU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3MWU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3MWU, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3mwu_A] [3mwu]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 3MWU: [EFh] [S_TKc ] by SMART
  • Other resources with information on 3MWU
  • Community annotation for 3MWU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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