3MYR date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL, F3S, IMD, MG, NFV, SF4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
G, C, E, A


H, B, F, D


Primary referenceThe crystal structure of the [NiFe] hydrogenase from the photosynthetic bacterium Allochromatium vinosum: characterization of the oxidized enzyme (Ni-A state)., Ogata H, Kellers P, Lubitz W, J Mol Biol. 2010 Sep 17;402(2):428-44. Epub 2010 Jul 29. PMID:20673834
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1071 Kb) [Save to disk]
  • Biological Unit Coordinates (3myr.pdb1.gz) 270 Kb
  • Biological Unit Coordinates (3myr.pdb2.gz) 272 Kb
  • Biological Unit Coordinates (3myr.pdb3.gz) 272 Kb
  • Biological Unit Coordinates (3myr.pdb4.gz) 272 Kb
  • Biological Unit Coordinates (3myr.pdb5.gz) 533 Kb
  • Biological Unit Coordinates (3myr.pdb6.gz) 535 Kb
  • LPC: Ligand-Protein Contacts for 3MYR
  • CSU: Contacts of Structural Units for 3MYR
  • Structure Factors (2560 Kb)
  • Retrieve 3MYR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3MYR from S2C, [Save to disk]
  • Re-refined 3myr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3MYR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3myr] [3myr_A] [3myr_B] [3myr_C] [3myr_D] [3myr_E] [3myr_F] [3myr_G] [3myr_H]
  • SWISS-PROT database:

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