OCA Atlas for 3N5C

3N5C

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

CL, GDP

enzyme

Gene
Ontology

Chain	Function	Process	Component
A, B		synaptic vesicle endocytosis...

Primary reference

SAXS and X-ray crystallography suggest an unfolding model for the GDP/GTP conformational switch of the small GTPase Arf6., Biou V, Aizel K, Roblin P, Thureau A, Jacquet E, Hansson S, Guibert B, Guittet E, van Heijenoort C, Zeghouf M, Perez J, Cherfils J, J Mol Biol. 2010 Oct 1;402(4):696-707. Epub 2010 Aug 13. PMID:20709080

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]

Biological Unit Coordinates (3n5c.pdb1.gz) 28 Kb

Biological Unit Coordinates (3n5c.pdb2.gz) 29 Kb

LPC: Ligand-Protein Contacts for 3N5C

CSU: Contacts of Structural Units for 3N5C

Structure Factors (182 Kb)

Retrieve 3N5C in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3N5C from S2C, [Save to disk]

Re-refined 3n5c structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3N5C in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3n5c] [3n5c_A] [3n5c_B]

SWISS-PROT database:

Domain found in 3N5C: [ARF ] by SMART

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