OCA Atlas for 3N8K

3N8K

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

CL, D1X

enzyme

Gene
Ontology

Chain	Function	Process	Component
S, K, U, H, L, I, E, V, Q, A, D, G, F, P, N, X, R, W, M, B, O, C, T, J

Primary reference

Structural investigation of inhibitor designs targeting 3-dehydroquinate dehydratase from the shikimate pathway of Mycobacterium tuberculosis., Dias MV, Snee WC, Bromfield KM, Payne R, Palaninathan SK, Ciulli A, Howard NI, Abell C, Sacchettini JC, Blundell TL, Biochem J. 2011 Mar 17. PMID:21410435

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1119 Kb) [Save to disk]

Biological Unit Coordinates (3n8k.pdb1.gz) 556 Kb

Biological Unit Coordinates (3n8k.pdb2.gz) 557 Kb

LPC: Ligand-Protein Contacts for 3N8K

CSU: Contacts of Structural Units for 3N8K

Structure Factors (1479 Kb)

Retrieve 3N8K in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3N8K from S2C, [Save to disk]

Re-refined 3n8k structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3N8K in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3n8k] [3n8k_A] [3n8k_B] [3n8k_C] [3n8k_D] [3n8k_E] [3n8k_F] [3n8k_G] [3n8k_H] [3n8k_I] [3n8k_J] [3n8k_K] [3n8k_L] [3n8k_M] [3n8k_N] [3n8k_O] [3n8k_P] [3n8k_Q] [3n8k_R] [3n8k_S] [3n8k_T] [3n8k_U] [3n8k_V] [3n8k_W] [3n8k_X]

SWISS-PROT database:

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