4P7A Crystal Structure of human MLH1 date
authors Tempel, W., Lam, R., Zeng, H., Walker, J.R., Loppnau, P., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Wu, H., SGC, Structural.Genomics.Consortium.
compound source
symmetry
R_factor
R_Free 0.2537
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.30
ligand ADP, MG, UNX enzyme
note 4P7A supersedes 3NA3
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of the human MLH1 N-terminus: implications for predisposition to Lynch syndrome., Wu H, Zeng H, Lam R, Tempel W, Kerr ID, Min J, Acta Crystallogr F Struct Biol Commun. 2015 Aug;71(Pt 8):981-5. doi:, 10.1107/S2053230X15010183. Epub 2015 Jul 28. PMID:26249686
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (101 Kb) [Save to disk]
  • Biological Unit Coordinates (4p7a.pdb1.gz) 188 Kb
  • LPC: Ligand-Protein Contacts for 4P7A
  • CSU: Contacts of Structural Units for 4P7A
  • Structure Factors (1799 Kb)
  • Retrieve 4P7A in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4P7A from S2C, [Save to disk]
  • Re-refined 4p7a structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4P7A in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4P7A
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4P7A, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4p7a_A] [4p7a]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4P7A: [DNA_mis_repair] [HATPase_c ] by SMART
    • Other resources with information on 4P7A
  • Community annotation for 4P7A at PDBWiki (http://pdbwiki.org)

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