3NBT	Crystal structure of trimeric cytochrome c from horse heart	date
authors	Taketa, M., Komori, H., Hirota, S., Higuchi, Y.
compound		source
symmetry		R_factor R_Free 0.254
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.10
ligand	HEC, PEG, PG4, PGE	enzyme
Gene Ontology	Chain Function Process Component F, A, D, C, E, B
Primary reference	Cytochrome c polymerization by successive domain swapping at the C-terminal helix., Hirota S, Hattori Y, Nagao S, Taketa M, Komori H, Kamikubo H, Wang Z, Takahashi I, Negi S, Sugiura Y, Kataoka M, Higuchi Y, Proc Natl Acad Sci U S A. 2010 Jul 6. PMID:20615990

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (122 Kb) [Save to disk] Biological Unit Coordinates (3nbt.pdb1.gz) 59 Kb Biological Unit Coordinates (3nbt.pdb2.gz) 59 Kb LPC: Ligand-Protein Contacts for 3NBT CSU: Contacts of Structural Units for 3NBT Structure Factors (479 Kb) Retrieve 3NBT in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3NBT from S2C, [Save to disk] Re-refined 3nbt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3NBT in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3NBT

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 3NBT, from MSDmotif at EBI Fold representative 3nbt from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3nbt_F] [3nbt_B] [3nbt_A] [3nbt_E] [3nbt_D] [3nbt] [3nbt_C] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3NBT

Community annotation for 3NBT at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---