3NCF Hormone Hormone Receptor date Jun 04, 2010
title A Mutant Human Prolactin Receptor Antagonist H30a In Complex Mutant Extracellular Domain H188a Of The Human Prolactin Re
authors M.V.Kulkarni, M.C.Tettamanzi, J.W.Murphy, C.Keeler, D.G.Myszka, N.E.Chayen, E.J.Lolis, M.E.Hodsdon
compound source
Molecule: Prolactin
Chain: A
Fragment: Sequence Database Residues 43-227
Synonym: Prl
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hprl, Prl
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pt7l

Molecule: Prolactin Receptor
Chain: B
Fragment: Extracellular Domain Residues 26-234
Synonym: Prl-R
Engineered: Yes
Mutation: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hprlr, Prlr
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
symmetry Space Group: P 65
R_factor 0.157 R_Free 0.219
crystal
cell
length a length b length c angle alpha angle beta angle gamma
123.252 123.252 73.108 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.80 Å
ligand CL, NA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceTwo independent histidines, one in human prolactin and one in its receptor, are critical for pH dependent receptor recognition and activation., Kulkarni MV, Tettamanzi MC, Murphy JW, Keeler C, Myszka DG, Chayen NE, Lolis EJ, Hodsdon ME, J Biol Chem. 2010 Sep 30. PMID:20889499
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (76 Kb) [Save to disk]
  • Biological Unit Coordinates (3ncf.pdb1.gz) 71 Kb
  • LPC: Ligand-Protein Contacts for 3NCF
  • CSU: Contacts of Structural Units for 3NCF
  • Structure Factors (121 Kb)
  • Retrieve 3NCF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3NCF from S2C, [Save to disk]
  • Re-refined 3ncf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3NCF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3NCF
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3NCF, from MSDmotif at EBI
  • Fold representative 3ncf from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ncf] [3ncf_A] [3ncf_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3NCF: [FN3 ] by SMART
  • Other resources with information on 3NCF
  • Community annotation for 3NCF at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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