3NDH		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ACT, CL, NA, PGE, SO4	enzyme
note	3NDH is a representative structure
Primary reference	DNA intercalation without flipping in the specific ThaI-DNA complex., Firczuk M, Wojciechowski M, Czapinska H, Bochtler M, Nucleic Acids Res. 2011 Jan 1;39(2):744-54. Epub 2010 Sep 21. PMID:20861000

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (209 Kb) [Save to disk] Biological Unit Coordinates (3ndh.pdb1.gz) 202 Kb LPC: Ligand-Protein Contacts for 3NDH CSU: Contacts of Structural Units for 3NDH Structure Factors (824 Kb) Retrieve 3NDH in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3NDH from S2C, [Save to disk] Re-refined 3ndh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3NDH in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3ndh] [3ndh_A] [3ndh_B] [3ndh_C] [3ndh_D] SWISS-PROT database:

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