3NIZ Transferase date Jun 16, 2010
title Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 Wit Bound.
authors A.K.Wernimont, A.Dong, J.Lew, Y.H.Lin, A.Hassanali, C.H.Arrowsmit A.M.Edwards, J.Weigelt, C.Bountra, A.Bochkarev, R.Hui, J.D.Artz, Structural Genomics Consortium (Sgc)
compound source
Molecule: Rhodanese Family Protein
Chain: A
Engineered: Yes
 Organism_scientific: Cryptosporidium Parvum
Organism_taxid: 353152
Strain: Iowa II
Gene: Cgd5_2510
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 43 21 2
R_factor 0.221 R_Free 0.256
crystal
cell
length a length b length c angle alpha angle beta angle gamma
64.337 64.337 200.039 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand ADP, MG enzyme
Gene CGD5
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk]
  • Biological Unit Coordinates (3niz.pdb1.gz) 48 Kb
  • Biological Unit Coordinates (3niz.pdb2.gz) 95 Kb
  • LPC: Ligand-Protein Contacts for 3NIZ
  • CSU: Contacts of Structural Units for 3NIZ
  • Structure Factors (510 Kb)
  • Retrieve 3NIZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3NIZ from S2C, [Save to disk]
  • Re-refined 3niz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3NIZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3NIZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3NIZ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3niz_A] [3niz]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3NIZ: [S_TKc ] by SMART
    • Other resources with information on 3NIZ
  • Community annotation for 3NIZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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