3NKN	Crystal structure of mouse autotaxin in complex with 14:0-LPA	date
authors	Nishimasu, H., Ishitani, R., Mihara, E., Takagi, J., Aoki, J., Nureki, O.
compound		source
symmetry		R_factor R_Free 0.2337
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	1.80
ligand	BMA, CA, EDO, K, MAN, NA, NAG, NKN, SCN, ZN	enzyme
Gene Ontology	Chain Function Process Component A phosphodiesterase I activity... scavenger receptor activity
Primary reference	Crystal structure of autotaxin and insight into GPCR activation by lipid mediators., Nishimasu H, Okudaira S, Hama K, Mihara E, Dohmae N, Inoue A, Ishitani R, Takagi J, Aoki J, Nureki O, Nat Struct Mol Biol. 2011 Feb;18(2):205-12. doi: 10.1038/nsmb.1998. Epub 2011 Jan, 16. PMID:21240269

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (152 Kb) [Save to disk] Biological Unit Coordinates (3nkn.pdb1.gz) 144 Kb LPC: Ligand-Protein Contacts for 3NKN CSU: Contacts of Structural Units for 3NKN Structure Factors (1267 Kb) Retrieve 3NKN in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3NKN from S2C, [Save to disk] Re-refined 3nkn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3NKN in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3NKN

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 3NKN, from MSDmotif at EBI Fold representative 3nkn from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3nkn] [3nkn_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3NKN: [Endonuclease_NS] [NUC] [SO ] by SMART

Other resources with information on 3NKN

Community annotation for 3NKN at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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