3NMP Hormone Binding Protein date Jun 22, 2010
title Crystal Structure Of The Abscisic Receptor Pyl2 Mutant A93f With Pyrabactin
authors X.E.Zhou, K.Melcher, L.M.Ng, F.F.Soon, Y.Xu, K.M.Suino-Powell, A J.Li, E.L.Yong, H.E.Xu
compound source
Molecule: Abscisic Acid Receptor Pyl2
Chain: A, B, C
Synonym: Pyr1-Like Protein 2, Regulatory Components Of Aba 14;
Engineered: Yes
Mutation: Yes
Organism_scientific: Arabidopsis Thaliana
Organism_common: Mouse-Ear Cress,Thale-Cress
Organism_taxid: 3702
Gene: Pyl2, Rcar14, At2g26040, T19l18.15
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21
Expression_system_vector: Plasmid
Expression_system_plasmid: Pet24a
symmetry Space Group: C 2 2 21
R_factor 0.234 R_Free 0.266
crystal
cell
length a length b length c angle alpha angle beta angle gamma
62.084 105.571 182.901 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand PYV enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, B
  • protein phosphatase inhibito...


  • Primary referenceIdentification and mechanism of ABA receptor antagonism., Melcher K, Xu Y, Ng LM, Zhou XE, Soon FF, Chinnusamy V, Suino-Powell KM, Kovach A, Tham FS, Cutler SR, Li J, Yong EL, Zhu JK, Xu HE, Nat Struct Mol Biol. 2010 Sep;17(9):1102-8. Epub 2010 Aug 22. PMID:20729862
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (188 Kb) [Save to disk]
  • Biological Unit Coordinates (3nmp.pdb1.gz) 122 Kb
  • Biological Unit Coordinates (3nmp.pdb2.gz) 123 Kb
  • LPC: Ligand-Protein Contacts for 3NMP
  • CSU: Contacts of Structural Units for 3NMP
  • Structure Factors (490 Kb)
  • Retrieve 3NMP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3NMP from S2C, [Save to disk]
  • Re-refined 3nmp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3NMP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3NMP
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3NMP, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3nmp_C] [3nmp_A] [3nmp_B] [3nmp]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3NMP
  • Community annotation for 3NMP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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