3NPZ Hormone Hormone Receptor date Jun 29, 2010
title Prolactin Receptor (Prlr) Complexed With The Natural Hormone
authors J.Van Agthoven, P.England, V.Goffin, I.Broutin
compound source
Molecule: Prolactin
Chain: A
Synonym: Prl
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hcg_36753, Prl, Rp3-404k8.1-001
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pt7l

Molecule: Prolactin Receptor
Chain: B, C
Fragment: Prlr (Unp Residues 20-229)
Synonym: Prl-R, Lactogen Receptor
Engineered: Yes

Organism_scientific: Rattus Norvegicus
Organism_common: Brown Rat,Rat,Rats
Organism_taxid: 10116
Gene: Prlr
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pqe70
symmetry Space Group: P 43 21 2
R_factor 0.234 R_Free 0.292
crystal
cell
length a length b length c angle alpha angle beta angle gamma
92.174 92.174 216.072 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.35 Å
Gene HCG
Gene
Ontology
ChainFunctionProcessComponent
A


C, B


Primary referenceStructural Characterization of the Stem-Stem Dimerization Interface between Prolactin Receptor Chains Complexed with the Natural Hormone., van Agthoven J, Zhang C, Tallet E, Raynal B, Hoos S, Baron B, England P, Goffin V, Broutin I, J Mol Biol. 2010 Sep 25. PMID:20875426
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (93 Kb) [Save to disk]
  • Biological Unit Coordinates (3npz.pdb1.gz) 88 Kb
  • CSU: Contacts of Structural Units for 3NPZ
  • Structure Factors (107 Kb)
  • Retrieve 3NPZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3NPZ from S2C, [Save to disk]
  • Re-refined 3npz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3NPZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3NPZ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3NPZ, from MSDmotif at EBI
  • Fold representative 3npz from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3npz_A] [3npz_B] [3npz] [3npz_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3NPZ: [FN3 ] by SMART
  • Other resources with information on 3NPZ
  • Community annotation for 3NPZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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