3NW5 Transferase date Jul 09, 2010
title Crystal Structure Of Insulin-Like Growth Factor 1 Receptor ( Complex With A Carbon-Linked Proline Isostere Inhibitor (11
authors J.S.Sack
compound source
Molecule: Insulin-Like Growth Factor 1 Receptor
Chain: A
Fragment: Kinase Domain (Residues 982-1286)
Synonym: Insulin-Like Growth Factor I Receptor, Igf-I Recep
Ec: 2.7.10.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Igf1r
Expression_system: Unidentified Baculovirus
Expression_system_taxid: 10469
symmetry Space Group: C 1 2 1
R_factor 0.193 R_Free 0.254
crystal
cell
length a length b length c angle alpha angle beta angle gamma
106.642 41.289 78.183 90.00 120.21 90.00
method X-Ray Diffractionresolution 2.14 Å
ligand LGX BindingDB enzyme Transferase E.C.2.7.10.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceProline isosteres in a series of 2,4-disubstituted pyrrolo[1,2-f][1,2,4]triazine inhibitors of IGF-1R kinase and IR kinase., Sampognaro AJ, Wittman MD, Carboni JM, Chang C, Greer AF, Hurlburt WW, Sack JS, Vyas DM, Bioorg Med Chem Lett. 2010 Sep 1;20(17):5027-30. Epub 2010 Jul 15. PMID:20675137
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk]
  • Biological Unit Coordinates (3nw5.pdb1.gz) 54 Kb
  • LPC: Ligand-Protein Contacts for 3NW5
  • CSU: Contacts of Structural Units for 3NW5
  • Structure Factors (213 Kb)
  • Retrieve 3NW5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3NW5 from S2C, [Save to disk]
  • Re-refined 3nw5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3NW5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3NW5
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3NW5, from MSDmotif at EBI
  • Fold representative 3nw5 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3nw5] [3nw5_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3NW5: [TyrKc ] by SMART
  • Other resources with information on 3NW5
  • Community annotation for 3NW5 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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