3O4W Transferase date Jul 27, 2010
title Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iv
authors E.B.Kuettner, K.Kettner, A.Keim, T.M.Kriegel, N.Strater
compound source
Molecule: Hexokinase
Chain: A, B
Ec: 2.7.1.1
Engineered: Yes
 Organism_scientific: Kluyveromyces Lactis
Organism_common: Yeast
Organism_taxid: 28985
Strain: Cbs2359152
Gene: Klla0d11352g, Rag5
Expression_system: Kluyveromyces Lactis
Expression_system_taxid: 28985
Expression_system_strain: Ja6-Delta-Rag5
Expression_system_vector_type: Pts32x
Expression_system_plasmid: Ptsrag5
symmetry Space Group: P 1 21 1
R_factor 0.169 R_Free 0.220
crystal
cell
length a length b length c angle alpha angle beta angle gamma
73.710 91.990 92.580 90.00 110.92 90.00
method X-Ray Diffractionresolution 1.61 Å
ligand GOL, NHE, SO4 enzyme Transferase E.C.2.7.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • hexokinase activity


    • Primary referenceCrystal Structure of Hexokinase KlHxk1 of Kluyveromyces lactis: A MOLECULAR BASIS FOR UNDERSTANDING THE CONTROL OF YEAST HEXOKINASE FUNCTIONS VIA COVALENT MODIFICATION AND OLIGOMERIZATION., Kuettner EB, Kettner K, Keim A, Svergun DI, Volke D, Singer D, Hoffmann R, Muller EC, Otto A, Kriegel TM, Strater N, J Biol Chem. 2010 Dec 24;285(52):41019-33. Epub 2010 Oct 12. PMID:20943665
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (323 Kb) [Save to disk]
  • Biological Unit Coordinates (3o4w.pdb1.gz) 317 Kb
  • LPC: Ligand-Protein Contacts for 3O4W
  • CSU: Contacts of Structural Units for 3O4W
  • Structure Factors (1069 Kb)
  • Retrieve 3O4W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3O4W from S2C, [Save to disk]
  • Re-refined 3o4w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3O4W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3O4W
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3O4W, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3o4w_A] [3o4w] [3o4w_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3O4W
  • Community annotation for 3O4W at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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