3O5X	Hydrolase	date	Jul 28, 2010
title	Crystal Structure Of The Oncogenic Tyrosine Phosphatase Shp2 With A Salicylic Acid-Based Small Molecule Inhibitor
authors	Z.Y.Zhang, X.Zhang, Y.He, S.Liu, Z.Yu, Z.Jiang, Z.Yang, Y.Dong, S.C.Nabinger, L.Wu, A.M.Gunawan, L.Wang, R.J.Chan
compound		source
Molecule: Tyrosine-Protein Phosphatase Non-Receptor Type 11 Chain: A Fragment: Unp Residues 262-532, Catalytic Domain Synonym: Protein-Tyrosine Phosphatase 2c, Ptp-2c, Protein-T Phosphatase 1d, Ptp-1d, Sh-Ptp3, Sh-Ptp2, Shp-2, Shp2; Ec: 3.1.3.48		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
symmetry	Space Group: P 1 21 1	R_factor 0.196 R_Free 0.238
crystal cell	length a length b length c angle alpha angle beta angle gamma 39.544 75.829 48.214 90.00 98.53 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	JZG BindingDB	enzyme	Hydrolase E.C.3.1.3.48 BRENDA
note	3O5X supersedes 3JRL
Primary reference	Salicylic Acid Based Small Molecule Inhibitor for the Oncogenic Src Homology-2 Domain Containing Protein Tyrosine Phosphatase-2 (SHP2)., Zhang X, He Y, Liu S, Yu Z, Jiang ZX, Yang Z, Dong Y, Nabinger SC, Wu L, Gunawan AM, Wang L, Chan RJ, Zhang ZY, J Med Chem. 2010 Feb 19. PMID:20170098

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (50 Kb) [Save to disk] Biological Unit Coordinates (3o5x.pdb1.gz) 46 Kb LPC: Ligand-Protein Contacts for 3O5X CSU: Contacts of Structural Units for 3O5X Structure Factors (363 Kb) Retrieve 3O5X in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3O5X from S2C, [Save to disk] Re-refined 3o5x structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3O5X in 3D

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Visual 3D analysis of 3O5X

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 3O5X, from MSDmotif at EBI Fold representative 3o5x from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3o5x_A] SWISS-PROT database: Domain organization of by SWISSPFAM Alignments of the sequence of 3O5X with the sequences similar proteins can be viewed for 3O5X's classification at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list. A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification at ProtoMap. Click on the Cluster number.

Other resources with information on 3O5X

Community annotation for 3O5X at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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