3O77 Fluorescent Protein date Jul 30, 2010
title The Structure Of Ca2+ Sensor (Case-16)
authors L.Leder, W.Stark, F.Freuler, M.Marsh, M.Meyerhofer, T.Stettler, L. O.V.Britanova, L.A.Strukova, D.M.Chudakov
compound source
Molecule: Myosin Light Chain Kinase, Smooth Muscle,Green Fl Protein,Green Fluorescent Protein,Calmodulin-1;
Chain: A
Synonym: Mlck,Telokin
Ec: 2.7.11.18
Engineered: Yes
Mutation: Yes
Other_details: Chimera Protein Of Peptide Of M13 (Residues Unp P11799), C-Terminal Domain Of Green Fluorescent Protein 147-238, Unp P42212), Linker, N-Terminal Of Green Fluoresce (Residues 2-146, Unp P42212) And Residues 3-149 Of Calmodul P0dp23)
Organism_scientific: Gallus Gallus, Aequorea Victoria, Homo
Organism_common: Chicken, Jellyfish, Human
Organism_taxid: 9031, 6100, 9606
Gene: Mylk, Gfp, Calm1, Calm, Cam, Cam1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3) Tuner
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet41
symmetry Space Group: P 21 21 2
R_factor 0.198 R_Free 0.274
crystal
cell
length a length b length c angle alpha angle beta angle gamma
92.499 106.941 43.265 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.35 Å
ligand CA, CL, CR2, SO4 enzyme Transferase E.C.2.7.11.18 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe structure of Ca2+ sensor Case16 reveals the mechanism of reaction to low Ca2+ concentrations., Leder L, Stark W, Freuler F, Marsh M, Meyerhofer M, Stettler T, Mayr LM, Britanova OV, Strukova LA, Chudakov DM, Souslova EA, Sensors (Basel). 2010;10(9):8143-60. Epub 2010 Aug 30. PMID:22163646
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (141 Kb) [Save to disk]
  • Biological Unit Coordinates (3o77.pdb1.gz) 133 Kb
  • LPC: Ligand-Protein Contacts for 3O77
  • CSU: Contacts of Structural Units for 3O77
  • Structure Factors (271 Kb)
  • Retrieve 3O77 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3O77 from S2C, [Save to disk]
  • Re-refined 3o77 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3O77 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3O77
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3O77, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3o77] [3o77_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3O77: [EFh ] by SMART
  • Other resources with information on 3O77
  • Community annotation for 3O77 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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