3O96 Transferase date Aug 03, 2010
title Crystal Structure Of Human Akt1 With An Allosteric Inhibitor
authors W.C.Voegtli, W.I.Wu, H.A.Lord-Ondash, F.P.Dizon, G.P.A.Vigers, B.J.Brandhuber
compound source
Molecule: Rac-Alpha Serinethreonine-Protein Kinase
Chain: A
Fragment: Unp Residues 2-443
Synonym: Rac-Pk-Alpha, Protein Kinase B, Pkb, Proto-Oncogen
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Akt1, Pkb, Rac
Expression_system: Trichoplusia Ni
Expression_system_common: Cabbage Looper
Expression_system_taxid: 7111
Expression_system_cell_line: Hi5 Insect Cells
symmetry Space Group: P 1 21 1
R_factor 0.245 R_Free 0.308
crystal
cell
length a length b length c angle alpha angle beta angle gamma
49.310 69.940 61.850 90.00 100.60 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand IQO BindingDB enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • protein phosphorylation

  • Primary referenceCrystal structure of human AKT1 with an allosteric inhibitor reveals a new mode of kinase inhibition., Wu WI, Voegtli WC, Sturgis HL, Dizon FP, Vigers GP, Brandhuber BJ, PLoS One. 2010 Sep 23;5(9):e12913. PMID:20886116
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk]
  • Biological Unit Coordinates (3o96.pdb1.gz) 64 Kb
  • LPC: Ligand-Protein Contacts for 3O96
  • CSU: Contacts of Structural Units for 3O96
  • Structure Factors (198 Kb)
  • Retrieve 3O96 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3O96 from S2C, [Save to disk]
  • Re-refined 3o96 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3O96 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3O96
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3O96, from MSDmotif at EBI
  • Fold representative 3o96 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3o96] [3o96_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 3O96: [PH] [S_TK_X] [S_TKc ] by SMART
  • Other resources with information on 3O96
  • Community annotation for 3O96 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science