3OB9 Transcription Regulator date Aug 06, 2010
title Structure Of The Human Msl3 Chromo-Barrel Domain At 2.5 Angs Resolution
authors S.A.Moore, Y.Ferhatoglu
compound source
Molecule: Male-Specific Lethal 3-Like 1 (Drosophila), Isofo
Chain: A, B, C, D, E
Fragment: Hmsl3 (Unp Residues 2 To 93)
Synonym: Protein Msl3
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hcg_401190, Msl3, Msl3l1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 De3
Expression_system_vector_type: Glutathione S. Transferase F
Expression_system_plasmid: Pgex-6p3
symmetry Space Group: C 1 2 1
R_factor 0.226 R_Free 0.277
crystal
cell
length a length b length c angle alpha angle beta angle gamma
179.178 36.696 85.574 90.00 90.39 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand NHE, SO4 enzyme
Gene HCG
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, E, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (154 Kb) [Save to disk]
  • Biological Unit Coordinates (3ob9.pdb1.gz) 32 Kb
  • Biological Unit Coordinates (3ob9.pdb2.gz) 31 Kb
  • Biological Unit Coordinates (3ob9.pdb3.gz) 31 Kb
  • Biological Unit Coordinates (3ob9.pdb4.gz) 33 Kb
  • Biological Unit Coordinates (3ob9.pdb5.gz) 29 Kb
  • LPC: Ligand-Protein Contacts for 3OB9
  • CSU: Contacts of Structural Units for 3OB9
  • Structure Factors (306 Kb)
  • Retrieve 3OB9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3OB9 from S2C, [Save to disk]
  • Re-refined 3ob9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3OB9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3OB9
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3OB9, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ob9_E] [3ob9_B] [3ob9_A] [3ob9_D] [3ob9] [3ob9_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3OB9: [CHROMO ] by SMART
  • Other resources with information on 3OB9
  • Community annotation for 3OB9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science