3ODC date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceCrystal Structures of Poly(ADP-ribose) Polymerase-1 (PARP-1) Zinc Fingers Bound to DNA: STRUCTURAL AND FUNCTIONAL INSIGHTS INTO DNA-DEPENDENT PARP-1 ACTIVITY., Langelier MF, Planck JL, Roy S, Pascal JM, J Biol Chem. 2011 Mar 25;286(12):10690-701. Epub 2011 Jan 13. PMID:21233213
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (3odc.pdb1.gz) 22 Kb
  • Biological Unit Coordinates (3odc.pdb2.gz) 23 Kb
  • LPC: Ligand-Protein Contacts for 3ODC
  • CSU: Contacts of Structural Units for 3ODC
  • Structure Factors (437 Kb)
  • Retrieve 3ODC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3ODC from S2C, [Save to disk]
  • Re-refined 3odc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3ODC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3odc] [3odc_A] [3odc_B] [3odc_C] [3odc_D] [3odc_E] [3odc_F]
  • SWISS-PROT database:
  • Domain found in 3ODC: [zf-PARP ] by SMART

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