3OFM Transferase Transferase Inhibitor date Aug 15, 2010
title Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens
authors N.Bischoff, B.Olsen, J.Raaf, M.Bretner, O.G.Issinger, K.Niefind
compound source
Molecule: Casein Kinase II Subunit Alpha'
Chain: A
Synonym: Ck II Alpha'
Ec: 2.7.11.1
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ck2a2, Csnk2a2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1
R_factor 0.172 R_Free 0.207
crystal
cell
length a length b length c angle alpha angle beta angle gamma
46.690 47.570 50.570 112.40 89.49 91.30
method X-Ray Diffractionresolution 2.00 Å
ligand 4B0, CL enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of the Human Protein Kinase CK2 Catalytic Subunit CK2alpha' and Interaction Thermodynamics with the Regulatory Subunit CK2beta., Bischoff N, Olsen B, Raaf J, Bretner M, Issinger OG, Niefind K, J Mol Biol. 2011 Mar 18;407(1):1-12. Epub 2011 Jan 15. PMID:21241709
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (126 Kb) [Save to disk]
  • Biological Unit Coordinates (3ofm.pdb1.gz) 121 Kb
  • LPC: Ligand-Protein Contacts for 3OFM
  • CSU: Contacts of Structural Units for 3OFM
  • Structure Factors (173 Kb)
  • Retrieve 3OFM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3OFM from S2C, [Save to disk]
  • Re-refined 3ofm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3OFM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3OFM
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3OFM, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ofm_A] [3ofm]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3OFM: [S_TKc ] by SMART
    • Other resources with information on 3OFM
  • Community annotation for 3OFM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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