3OLL	Hormone Receptor Activator	date	Aug 26, 2010
title	Crystal Structure Of Phosphorylated Estrogen Receptor Beta L Binding Domain
authors	S.Moecklinghoff, R.Rose, C.Ottmann, L.Brunsveld
compound		source
Molecule: Estrogen Receptor Beta Chain: A, B Fragment: Ligand Binding Domain (Unp Residues 261-500) Synonym: Er-Beta, Nuclear Receptor Subfamily 3 Group A Memb Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Esr2, Estrb, Nr3a2 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Nuclear Receptor Coactivator 1 Chain: C, D Fragment: Unp Residues 683-701 Synonym: Ncoa-1, Steroid Receptor Coactivator 1, Src-1, Rip Protein Hin-2, Renal Carcinoma Antigen Ny-Ren-52, Class E B Helix-Loop-Helix Protein 74, Bhlhe74; Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
symmetry	Space Group: P 31	R_factor 0.175 R_Free 0.208
crystal cell	length a length b length c angle alpha angle beta angle gamma 71.860 71.860 113.280 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.50 Å
ligand	EST, PTR BindingDB	enzyme
Primary reference	Synthesis and crystal structure of a phosphorylated estrogen receptor ligand binding domain., Mocklinghoff S, Rose R, Carraz M, Visser A, Ottmann C, Brunsveld L, Chembiochem. 2010 Nov 2;11(16):2251-4. PMID:20922740

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (190 Kb) [Save to disk] Biological Unit Coordinates (3oll.pdb1.gz) 93 Kb Biological Unit Coordinates (3oll.pdb2.gz) 93 Kb Biological Unit Coordinates (3oll.pdb3.gz) 184 Kb LPC: Ligand-Protein Contacts for 3OLL CSU: Contacts of Structural Units for 3OLL Structure Factors (1478 Kb) Retrieve 3OLL in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3OLL from S2C, [Save to disk] Re-refined 3oll structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3OLL in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz. On AstexViewer, from MSD-EBI (viewer documentation). On RasMol (Install RasMol freeware) Here's help on how to use RasMol.

Visual 3D analysis of 3OLL

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 3OLL, from MSDmotif at EBI Fold representative 3oll from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3oll_A] [3oll_B] [3oll_C] [3oll_D] SWISS-PROT database: Domain organization of by SWISSPFAM Alignments of the sequence of 3OLL with the sequences similar proteins can be viewed for 3OLL's classification at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list. A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification at ProtoMap. Click on the Cluster number.

Other resources with information on 3OLL

Community annotation for 3OLL at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2010 Bioinformatics Unit Weizmann Institute of Science

---