3OLR Hydrolase date Aug 26, 2010
title Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide 1
authors X.Yu, J.P.Sun, S.Zhang, Z.Y.Zhang
compound source
Molecule: Tyrosine-Protein Phosphatase Non-Receptor Type 22
Chain: A, B, C, D
Fragment: Unp Residues 1-294
Synonym: Hematopoietic Cell Protein-Tyrosine Phosphatase 70 Lymphoid Phosphatase, Lyp;
Ec: 3.1.3.48
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ptpn22, Ptpn8
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid

Molecule: Skap2
Chain: E, F, G, H
Engineered: Yes

Synthetic: Yes
Other_details: This Sequence Is Derived From A Peptide Scre
symmetry Space Group: P 1
R_factor 0.162 R_Free 0.210
crystal
cell
length a length b length c angle alpha angle beta angle gamma
45.897 62.766 117.461 99.06 96.53 105.06
method X-Ray Diffractionresolution 2.50 Å
ligand PTR enzyme Hydrolase E.C.3.1.3.48 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (217 Kb) [Save to disk]
  • Biological Unit Coordinates (3olr.pdb1.gz) 55 Kb
  • Biological Unit Coordinates (3olr.pdb2.gz) 55 Kb
  • Biological Unit Coordinates (3olr.pdb3.gz) 55 Kb
  • Biological Unit Coordinates (3olr.pdb4.gz) 55 Kb
  • LPC: Ligand-Protein Contacts for 3OLR
  • CSU: Contacts of Structural Units for 3OLR
  • Structure Factors (585 Kb)
  • Retrieve 3OLR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3OLR from S2C, [Save to disk]
  • Re-refined 3olr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3OLR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3OLR
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3OLR, from MSDmotif at EBI
  • Fold representative 3olr from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3olr_B] [3olr] [3olr_D] [3olr_A] [3olr_F] [3olr_H] [3olr_G] [3olr_C] [3olr_E]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3OLR: [PTPc ] by SMART
  • Alignments of the sequence of 3OLR with the sequences similar proteins can be viewed for 3OLR's classification at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification at ProtoMap. Click on the Cluster number.
  • Other resources with information on 3OLR
  • Community annotation for 3OLR at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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