3OPI date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 7DA, MG, NA enzyme
Primary referenceAltering the Electrostatic Potential in the Major Groove: Thermodynamic and Structural Characterization of 7-Deaza-2'-deoxyadenosine:dT Base Pairing in DNA., Kowal EA, Ganguly M, Pallan PS, Marky LA, Gold B, Egli M, Stone MP, J Phys Chem B. 2011 Dec 1;115(47):13925-34. Epub 2011 Nov 8. PMID:22059929
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (33 Kb) [Save to disk]
  • Biological Unit Coordinates (3opi.pdb1.gz) 28 Kb
  • LPC: Ligand-Protein Contacts for 3OPI
  • CSU: Contacts of Structural Units for 3OPI
  • Structure Factors (294 Kb)
  • Retrieve 3OPI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3OPI from S2C, [Save to disk]
  • Re-refined 3opi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3OPI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3opi] [3opi_A] [3opi_B]
  • SWISS-PROT database:

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