3OPY	Transferase	date	Sep 02, 2010
title	Crystal Structure Of Pichia Pastoris Phosphofructokinase In State
authors	N.Strater, S.Marek, E.B.Kuettner, M.Kloos, A.Keim, A.Bruser, J.Kir T.Schoneberg
compound		source
Molecule: 6-Phosphofructo-1-Kinase Alpha-Subunit Chain: A, C, E, G Ec: 2.7.1.11		Organism_scientific: Pichia Pastoris Organism_common: Yeast Organism_taxid: 638632 Strain: Dsmz 70382
Molecule: 6-Phosphofructo-1-Kinase Beta-Subunit Chain: B, D, F, H Ec: 2.7.1.11		Organism_scientific: Pichia Pastoris Organism_common: Yeast Organism_taxid: 638632 Strain: Dsmz 70382
Molecule: 6-Phosphofructo-1-Kinase Gamma-Subunit Chain: I, J, K, L Ec: 2.7.1.11		Organism_scientific: Pichia Pastoris Organism_common: Yeast Organism_taxid: 638632 Strain: Dsmz 70382
symmetry	Space Group: P 1 21 1	R_factor 0.200 R_Free 0.232
crystal cell	length a length b length c angle alpha angle beta angle gamma 161.658 188.303 231.560 90.00 92.85 90.00
method	X-Ray Diffraction	resolution	3.05 Å
ligand	ATP, SO4	enzyme	Transferase E.C.2.7.1.11 BRENDA
Gene Ontology	Chain Function Process Component F, A, E, B, H, C, D, G 6-phosphofructokinase activi... J, K, I, L
Primary reference	Molecular architecture and structural basis of allosteric regulation of eukaryotic phosphofructokinases., Strater N, Marek S, Kuettner EB, Kloos M, Keim A, Bruser A, Kirchberger J, Schoneberg T, FASEB J. 2010 Sep 10. PMID:20833871

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2754 Kb) [Save to disk] Biological Unit Coordinates (3opy.pdb1.gz) 2736 Kb LPC: Ligand-Protein Contacts for 3OPY CSU: Contacts of Structural Units for 3OPY Structure Factors (2149 Kb) Retrieve 3OPY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3OPY from S2C, [Save to disk] Re-refined 3opy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3OPY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3OPY

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3OPY, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3opy] [3opy_F] [3opy_H] [3opy_G] [3opy_B] [3opy_C] [3opy_I] [3opy_D] [3opy_J] [3opy_L] [3opy_E] [3opy_A] [3opy_K] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3OPY

Community annotation for 3OPY at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---