3OV6	Immune System	date	Sep 15, 2010
title	Cd1c In Complex With Mpm (Mannosyl-Beta1-Phosphomycoketide)
authors	L.Scharf, N.S.Li, A.J.Hawk, D.Garzon, T.Zhang, A.R.Kazen, S.Shah, E.J.Haddadian, A.Saghatelian, J.D.Faraldo-Gomez, S.C.Meredith, J.A.Piccirilli, E.J.Adams
compound		source
Molecule: Beta-2-Microglobulin, T-Cell Surface Glycoprotein Cell Surface Glycoprotein Cd1b; Chain: A Fragment: Beta-2-Microglobulin Synonym: Beta-2-Microglobulin Form Pi 5.3 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Trichoplusia Ni Expression_system_taxid: 7111 Expression_system_strain: Bti-Tn-5b1-4 Expression_system_vector_type: Baculovirus Expression_system_plasmid: Pacgp67a
symmetry	Space Group: P 21 21 21	R_factor 0.240 R_Free 0.273
crystal cell	length a length b length c angle alpha angle beta angle gamma 53.724 87.087 88.808 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand	D12, MK0, NAG	enzyme
Gene Ontology	Chain Function Process Component A cellular response to iron io...
Primary reference	The 2.5 a structure of CD1c in complex with a mycobacterial lipid reveals an open groove ideally suited for diverse antigen presentation., Scharf L, Li NS, Hawk AJ, Garzon D, Zhang T, Fox LM, Kazen AR, Shah S, Haddadian EJ, Gumperz JE, Saghatelian A, Faraldo-Gomez JD, Meredith SC, Piccirilli JA, Adams EJ, Immunity. 2010 Dec 14;33(6):853-62. PMID:21167756

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (69 Kb) [Save to disk] Biological Unit Coordinates (3ov6.pdb1.gz) 64 Kb LPC: Ligand-Protein Contacts for 3OV6 CSU: Contacts of Structural Units for 3OV6 Structure Factors (187 Kb) Retrieve 3OV6 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3OV6 from S2C, [Save to disk] Re-refined 3ov6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3OV6 in 3D

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Visual 3D analysis of 3OV6

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3OV6, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3ov6] [3ov6_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3OV6: [IGc1 ] by SMART

Other resources with information on 3OV6

Community annotation for 3OV6 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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