3P1X Transcription Regulator date Sep 30, 2010
title Crystal Structure Of Drbm 2 Domain Of Interleukin Enhancer-B Factor 3 From Homo Sapiens, Northeast Structural Genomics C Target Hr4527e
authors J.Seetharaman, H.Neely, D.Wang, H.Janjua, K.Cunningham, L.Owens, R J.Liu, M.C.Baran, T.B.Acton, G.T.Montelione, L.Tong, J.F.Hunt, No Structural Genomics Consortium (Nesg)
compound source
Molecule: Interleukin Enhancer-Binding Factor 3
Chain: A, B
Fragment: Drbm 2 Domain Residues 520-594
Synonym: Nuclear Factor Of Activated T-Cells 90 Kda, Nf-At- Double-Stranded Rna-Binding Protein 76, Drbp76, Translation Protein 80, Tcp80, Nuclear Factor Associated With Dsrna, Nf Phase Phosphoprotein 4, Mpp4
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: C 1 2 1
R_factor 0.213 R_Free 0.250
length a length b length c angle alpha angle beta angle gamma
107.572 24.384 71.626 90.00 124.84 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand MSE enzyme
note 3P1X is a representative structure
A, B

Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (29 Kb) [Save to disk]
  • Biological Unit Coordinates (3p1x.pdb1.gz) 13 Kb
  • Biological Unit Coordinates (3p1x.pdb2.gz) 13 Kb
  • Biological Unit Coordinates (3p1x.pdb3.gz) 25 Kb
  • LPC: Ligand-Protein Contacts for 3P1X
  • CSU: Contacts of Structural Units for 3P1X
  • Structure Factors (217 Kb)
  • Retrieve 3P1X in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3P1X from S2C, [Save to disk]
  • Re-refined 3p1x structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3P1X in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3P1X
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3P1X, from MSDmotif at EBI
  • Fold representative 3p1x from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3p1x_B] [3p1x_A] [3p1x]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3P1X: [DSRM ] by SMART
  • Other resources with information on 3P1X
  • Community annotation for 3P1X at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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