3P1Y date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
D, B, A, C


Primary referenceCleavage of intron from the standard or non-standard position of the precursor tRNA by the splicing endonuclease of Aeropyrum pernix, a hyper-thermophilic Crenarchaeon, involves a novel RNA recognition site in the Crenarchaea specific loop., Hirata A, Kitajima T, Hori H, Nucleic Acids Res. 2011 Nov;39(21):9376-89. Epub 2011 Aug 16. PMID:21846775
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (216 Kb) [Save to disk]
  • Biological Unit Coordinates (3p1y.pdb1.gz) 107 Kb
  • Biological Unit Coordinates (3p1y.pdb2.gz) 107 Kb
  • CSU: Contacts of Structural Units for 3P1Y
  • Structure Factors (984 Kb)
  • Retrieve 3P1Y in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3P1Y from S2C, [Save to disk]
  • Re-refined 3p1y structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3P1Y in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3p1y] [3p1y_A] [3p1y_B] [3p1y_C] [3p1y_D]
  • SWISS-PROT database:

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