3PDC		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ZYI	enzyme
Gene Ontology	Chain Function Process Component B, A
Primary reference	Discovery of potent inhibitors of soluble epoxide hydrolase by combinatorial library design and structure-based virtual screening., Xing L, McDonald JJ, Kolodziej SA, Kurumbail RG, Williams JM, Warren CJ, O'Neal JM, Skepner JE, Roberds SL, J Med Chem. 2011 Mar 10;54(5):1211-22. Epub 2011 Feb 8. PMID:21302953

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (113 Kb) [Save to disk] Biological Unit Coordinates (3pdc.pdb1.gz) 108 Kb LPC: Ligand-Protein Contacts for 3PDC CSU: Contacts of Structural Units for 3PDC Structure Factors (284 Kb) Retrieve 3PDC in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3PDC from S2C, [Save to disk] Re-refined 3pdc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3PDC in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3pdc] [3pdc_A] [3pdc_B] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---