3PDR date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand K, MN enzyme
Primary referenceInsights into Metalloregulation by M-box Riboswitch RNAs via Structural Analysis of Manganese-Bound Complexes., Ramesh A, Wakeman CA, Winkler WC, J Mol Biol. 2011 Apr 8;407(4):556-70. Epub 2011 Feb 15. PMID:21315082
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (152 Kb) [Save to disk]
  • Biological Unit Coordinates (3pdr.pdb1.gz) 73 Kb
  • Biological Unit Coordinates (3pdr.pdb2.gz) 74 Kb
  • Biological Unit Coordinates (3pdr.pdb3.gz) 144 Kb
  • LPC: Ligand-Protein Contacts for 3PDR
  • CSU: Contacts of Structural Units for 3PDR
  • Structure Factors (710 Kb)
  • Retrieve 3PDR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3PDR from S2C, [Save to disk]
  • Re-refined 3pdr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3PDR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3pdr] [3pdr_A] [3pdr_X]
  • SWISS-PROT database:

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