3PG9	Transferase Transferase Inhibitor	date	Oct 31, 2010
title	Thermotoga Maritima Dah7p Synthase In Complex With Inhibitor
authors	P.J.Cross, R.C.J.Dobson, M.L.Patchett, E.J.Parker
compound		source
Molecule: Phospho-2-Dehydro-3-Deoxyheptonate Aldolase Chain: A, B, C, D, E, F, G, H Synonym: 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Syntha Synthase, Phospho-2-Keto-3-Deoxyheptonate Aldolase; Ec: 2.5.1.54 Engineered: Yes		Organism_scientific: Thermotoga Maritima Organism_taxid: 2336 Strain: Msb8 (Dsm3109) Gene: Arof Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pt7-7
symmetry	Space Group: P 1 21 1	R_factor 0.171 R_Free 0.222
crystal cell	length a length b length c angle alpha angle beta angle gamma 81.610 121.002 133.379 90.00 92.12 90.00
method	X-Ray Diffraction	resolution	2.35 Å
ligand	AZI, CL, NO3, TYR	enzyme	Transferase E.C.2.5.1.54 BRENDA
Gene Ontology	Chain Function Process Component F, A, E, B, H, C, D, G
Primary reference	Tyrosine latching of a regulatory gate affords allosteric control of aromatic amino acid biosynthesis., Cross PJ, Dobson RC, Patchett ML, Parker EJ, J Biol Chem. 2011 Mar 25;286(12):10216-24. Epub 2011 Jan 30. PMID:21282100

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (857 Kb) [Save to disk] Biological Unit Coordinates (3pg9.pdb1.gz) 426 Kb Biological Unit Coordinates (3pg9.pdb2.gz) 424 Kb LPC: Ligand-Protein Contacts for 3PG9 CSU: Contacts of Structural Units for 3PG9 Structure Factors (2582 Kb) Retrieve 3PG9 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3PG9 from S2C, [Save to disk] Re-refined 3pg9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3PG9 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3PG9

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3PG9, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3pg9_E] [3pg9_B] [3pg9_H] [3pg9_A] [3pg9_C] [3pg9_D] [3pg9_G] [3pg9_F] [3pg9] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3PG9

Community annotation for 3PG9 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---