OCA Atlas for 3PIQ

3PIQ

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Primary reference

Crystal structure of human antibody 2909 reveals conserved features of quaternary-specific antibodies that potently neutralize HIV-1., Changela A, Wu X, Yang Y, Zhang B, Zhu J, Nardone GA, O'Dell S, Pancera M, Gorny MK, Phogat S, Robinson JE, Stamatatos L, Zolla-Pazner S, Mascola JR, Kwong PD, J Virol. 2010 Dec 29. PMID:21191009

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (844 Kb) [Save to disk]

Biological Unit Coordinates (3piq.pdb1.gz) 145 Kb

Biological Unit Coordinates (3piq.pdb2.gz) 143 Kb

Biological Unit Coordinates (3piq.pdb3.gz) 146 Kb

Biological Unit Coordinates (3piq.pdb4.gz) 141 Kb

Biological Unit Coordinates (3piq.pdb5.gz) 146 Kb

Biological Unit Coordinates (3piq.pdb6.gz) 149 Kb

CSU: Contacts of Structural Units for 3PIQ

Structure Factors (653 Kb)

Retrieve 3PIQ in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3PIQ from S2C, [Save to disk]

Re-refined 3piq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3PIQ in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3piq] [3piq_A] [3piq_B] [3piq_C] [3piq_D] [3piq_E] [3piq_F] [3piq_G] [3piq_H] [3piq_I] [3piq_J] [3piq_K] [3piq_L]

SWISS-PROT database:

Domains found in 3PIQ: [IG_like] [IGv ] by SMART

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