3PKZ date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand EDO, GOL, SO4 enzyme
note 3PKZ is a representative structure
Gene SAP013A ; SAP095A ; SAP096A
Gene
Ontology
ChainFunctionProcessComponent
K, G, B, I, F, A, L, D, E, C, H, J


Primary referenceStructural basis for catalytic activation of a serine recombinase., Keenholtz RA, Rowland SJ, Boocock MR, Stark WM, Rice PA, Structure. 2011 Jun 8;19(6):799-809. PMID:21645851
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (517 Kb) [Save to disk]
  • Biological Unit Coordinates (3pkz.pdb1.gz) 172 Kb
  • Biological Unit Coordinates (3pkz.pdb2.gz) 171 Kb
  • Biological Unit Coordinates (3pkz.pdb3.gz) 173 Kb
  • LPC: Ligand-Protein Contacts for 3PKZ
  • CSU: Contacts of Structural Units for 3PKZ
  • Structure Factors (2230 Kb)
  • Retrieve 3PKZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3PKZ from S2C, [Save to disk]
  • Re-refined 3pkz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3PKZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3pkz] [3pkz_A] [3pkz_B] [3pkz_C] [3pkz_D] [3pkz_E] [3pkz_F] [3pkz_G] [3pkz_H] [3pkz_I] [3pkz_J] [3pkz_K] [3pkz_L]
  • SWISS-PROT database:
  • Domain found in 3PKZ: [Resolvase ] by SMART

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