3PMD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 11A, CL enzyme
Gene GBAA
Primary referenceStructural Insights into Inhibition of Bacillus anthracis Sporulation by a Novel Class of Non-heme Globin Sensor Domains., Stranzl GR, Santelli E, Bankston LA, La Clair C, Bobkov A, Schwarzenbacher R, Godzik A, Perego M, Grynberg M, Liddington RC, J Biol Chem. 2011 Mar 11;286(10):8448-58. Epub 2011 Jan 7. PMID:21216948
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (61 Kb) [Save to disk]
  • Biological Unit Coordinates (3pmd.pdb1.gz) 112 Kb
  • LPC: Ligand-Protein Contacts for 3PMD
  • CSU: Contacts of Structural Units for 3PMD
  • Structure Factors (368 Kb)
  • Retrieve 3PMD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3PMD from S2C, [Save to disk]
  • Re-refined 3pmd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3PMD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3pmd] [3pmd_A]
  • SWISS-PROT database:

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