3PUR date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 2HG, FE2, ZN enzyme
Primary referenceOncometabolite 2-hydroxyglutarate is a competitive inhibitor of alpha-ketoglutarate-dependent dioxygenases., Xu W, Yang H, Liu Y, Yang Y, Wang P, Kim SH, Ito S, Yang C, Wang P, Xiao MT, Liu LX, Jiang WQ, Liu J, Zhang JY, Wang B, Frye S, Zhang Y, Xu YH, Lei QY, Guan KL, Zhao SM, Xiong Y, Cancer Cell. 2011 Jan 18;19(1):17-30. PMID:21251613
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (172 Kb) [Save to disk]
  • Biological Unit Coordinates (3pur.pdb1.gz) 84 Kb
  • Biological Unit Coordinates (3pur.pdb2.gz) 86 Kb
  • LPC: Ligand-Protein Contacts for 3PUR
  • CSU: Contacts of Structural Units for 3PUR
  • Structure Factors (1031 Kb)
  • Retrieve 3PUR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3PUR from S2C, [Save to disk]
  • Re-refined 3pur structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3PUR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3pur] [3pur_A] [3pur_C]
  • SWISS-PROT database:
  • Domains found in 3PUR: [JmjC] [PHD ] by SMART

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