OCA Atlas for 3PVN

3PVN

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

CA, ZN

enzyme

Gene
Ontology

Chain	Function	Process	Component
N, K, E, O, Q, D, H, C, J, S, P, A, F, M, B, T, G, R, L, I

Primary reference

A Staggered Decameric Assembly of Human C-Reactive Protein Stabilized by Zinc Ions Revealed by X-ray Crystallography., Guillon C, Bigouagou UM, Folio C, Jeannin P, Delneste Y, Gouet P, Protein Pept Lett. 2014;22(3):248-55. PMID:25552313

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (714 Kb) [Save to disk]

Biological Unit Coordinates (3pvn.pdb1.gz) 185 Kb

Biological Unit Coordinates (3pvn.pdb2.gz) 184 Kb

Biological Unit Coordinates (3pvn.pdb3.gz) 184 Kb

Biological Unit Coordinates (3pvn.pdb4.gz) 181 Kb

LPC: Ligand-Protein Contacts for 3PVN

CSU: Contacts of Structural Units for 3PVN

Structure Factors (2378 Kb)

Retrieve 3PVN in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3PVN from S2C, [Save to disk]

Re-refined 3pvn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3PVN in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3pvn] [3pvn_A] [3pvn_B] [3pvn_C] [3pvn_D] [3pvn_E] [3pvn_F] [3pvn_G] [3pvn_H] [3pvn_I] [3pvn_J] [3pvn_K] [3pvn_L] [3pvn_M] [3pvn_N] [3pvn_O] [3pvn_P] [3pvn_Q] [3pvn_R] [3pvn_S] [3pvn_T]

SWISS-PROT database:

Domain found in 3PVN: [PTX ] by SMART

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