3PXC Protein Binding date Dec 09, 2010
title Impact Of Brca1 Brct Domain Missense Substitutions On Phosph Recognition: R1699q
authors N.Coquelle, R.Green, J.N.M.Glover
compound source
Molecule: Breast Cancer Type 1 Susceptibility Protein
Chain: X
Fragment: Brct Domain, Unp Residues 1646-1859
Synonym: Ring Finger Protein 53
Ec: 6.3.2.-
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Brca1, Rnf53
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21 Gold
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Plm1
symmetry Space Group: P 61 2 2
R_factor 0.228 R_Free 0.270
crystal
cell
length a length b length c angle alpha angle beta angle gamma
114.620 114.620 122.110 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.80 Å
ligand NI, SO4 enzyme Ligase E.C.6.3.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
X


Primary referenceImpact of BRCA1 BRCT domain missense substitutions on phospho-peptide recognition., Coquelle N, Green R, Glover JN, Biochemistry. 2011 Apr 7. PMID:21473589
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (78 Kb) [Save to disk]
  • Biological Unit Coordinates (3pxc.pdb1.gz) 73 Kb
  • LPC: Ligand-Protein Contacts for 3PXC
  • CSU: Contacts of Structural Units for 3PXC
  • Structure Factors (92 Kb)
  • Retrieve 3PXC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3PXC from S2C, [Save to disk]
  • Re-refined 3pxc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3PXC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3PXC
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3PXC, from MSDmotif at EBI
  • Fold representative 3pxc from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3pxc_X] [3pxc]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3PXC: [BRCT ] by SMART
  • Other resources with information on 3PXC
  • Community annotation for 3PXC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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