3PXP Crystal structure of a PAS and DNA binding domain containing protein (Caur_2278) from CHLOROFLEXUS AURANTIACUS J-10-FL at 2.30 A resolution date
authors JCSG, Joint.Center.for.Structural.Genomics.
compound source
symmetry
R_factor
R_Free 0.206
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.30
ligand CL, EDO, MSE, MYR enzyme
Gene CAUR
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceStructure of an MmyB-Like Regulator from C. aurantiacus, Member of a New Transcription Factor Family Linked to Antibiotic Metabolism in Actinomycetes., Xu Q, van Wezel GP, Chiu HJ, Jaroszewski L, Klock HE, Knuth MW, Miller MD, Lesley SA, Godzik A, Elsliger MA, Deacon AM, Wilson IA, PLoS One. 2012;7(7):e41359. Epub 2012 Jul 26. PMID:22844465
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (315 Kb) [Save to disk]
  • Biological Unit Coordinates (3pxp.pdb1.gz) 106 Kb
  • Biological Unit Coordinates (3pxp.pdb2.gz) 104 Kb
  • Biological Unit Coordinates (3pxp.pdb3.gz) 105 Kb
  • Biological Unit Coordinates (3pxp.pdb4.gz) 205 Kb
  • Biological Unit Coordinates (3pxp.pdb5.gz) 206 Kb
  • LPC: Ligand-Protein Contacts for 3PXP
  • CSU: Contacts of Structural Units for 3PXP
  • Structure Factors (3194 Kb)
  • Retrieve 3PXP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3PXP from S2C, [Save to disk]
  • Re-refined 3pxp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3PXP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3PXP
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3PXP, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3pxp] [3pxp_C] [3pxp_A] [3pxp_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3PXP: [HTH_XRE ] by SMART
    • Other resources with information on 3PXP
  • Community annotation for 3PXP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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