3PY5 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand AMP, K, MN, TLA enzyme
Gene BAB1
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceBrabA.11339.a: anomalous diffraction and ligand binding guide towards the elucidation of the function of a `putative beta-lactamase-like protein' from Brucella melitensis., Abendroth J, Sankaran B, Edwards TE, Gardberg AS, Dieterich S, Bhandari J, Napuli AJ, Van Voorhis WC, Staker BL, Myler PJ, Stewart LJ, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 Sep 1;67(Pt, 9):1106-12. Epub 2011 Aug 16. PMID:21904058
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (103 Kb) [Save to disk]
  • Biological Unit Coordinates (3py5.pdb1.gz) 192 Kb
  • LPC: Ligand-Protein Contacts for 3PY5
  • CSU: Contacts of Structural Units for 3PY5
  • Structure Factors (1486 Kb)
  • Retrieve 3PY5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3PY5 from S2C, [Save to disk]
  • Re-refined 3py5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3PY5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3py5] [3py5_A]
  • SWISS-PROT database:
  • Domain found in 3PY5: [Lactamase_B ] by SMART

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