3Q0W Transcription Transcription Inhibitor date Dec 16, 2010
title Ethr From Mycobacterium Tuberculosis In Complex With Compoun
authors M.Flipo, M.Desrose, B.Dirie, X.Carette, F.Leroux, Z.Lens, P.Ruckto C.Piveteau, F.Demirkaya, C.Locht, V.Villeret, T.Christophe, H.K. P.Brodin, B.Deprez, A.Baulard, N.Willand
compound source
Molecule: Hth-Type Transcriptional Regulator Ethr
Chain: A
Engineered: Yes
 Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 1773
Gene: Ethr, Etar, Mt3970, Rv3855
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 41 21 2
R_factor 0.192 R_Free 0.234
crystal
cell
length a length b length c angle alpha angle beta angle gamma
119.820 119.820 33.590 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand GOL, LL5 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural activation of the transcriptional repressor EthR from Mycobacterium tuberculosis by single amino acid change mimicking natural and synthetic ligands., Carette X, Blondiaux N, Willery E, Hoos S, Lecat-Guillet N, Lens Z, Wohlkonig A, Wintjens R, Soror SH, Frenois F, Dirie B, Villeret V, England P, Lippens G, Deprez B, Locht C, Willand N, Baulard AR, Nucleic Acids Res. 2011 Dec 9. PMID:22156370
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk]
  • Biological Unit Coordinates (3q0w.pdb1.gz) 66 Kb
  • LPC: Ligand-Protein Contacts for 3Q0W
  • CSU: Contacts of Structural Units for 3Q0W
  • Structure Factors (469 Kb)
  • Retrieve 3Q0W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3Q0W from S2C, [Save to disk]
  • Re-refined 3q0w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3Q0W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3Q0W
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3Q0W, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3q0w] [3q0w_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3Q0W
  • Community annotation for 3Q0W at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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